canvasXpress - Visualization Package for CanvasXpress in R
Enables creation of visualizations using the CanvasXpress framework in R. CanvasXpress is a standalone JavaScript library for reproducible research with complete tracking of data and end-user modifications stored in a single PNG image that can be played back. See <https://www.canvasxpress.org> for more information.
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analyticsbioinformaticschartchartingdashdashboarddata-analyticsdata-sciencedata-visualizationgenomicsgraphsjavascriptnetworknetwork-visualizationpythonreproducible-researchshinyvisualization
11.95 score 317 stars 1 dependents 170 scripts 1.3k downloadscanvasXpress.data - Datasets for the 'canvasXpress' Package
Contains the prepared data that is needed for the 'shiny' application examples in the 'canvasXpress' package. This package also includes datasets used for automated 'testthat' tests. Scotto L, Narayan G, Nandula SV, Arias-Pulido H et al. (2008) <doi:10.1002/gcc.20577>. Davis S, Meltzer PS (2007) <doi:10.1093/bioinformatics/btm254>.
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3.48 score 1 stars 1 scripts 397 downloadsCanvasXpressBio - CanvasXpress Visualizations for Bioconductor Data Structures
Bridges the CanvasXpress interactive visualization library to core Bioconductor data structures. Provides a generic to render a SummarizedExperiment, and any class that extends it such as SingleCellExperiment or DESeqDataSet, as an interactive CanvasXpress heatmap that carries its row and column annotations, together with a volcano helper for differential-expression result tables. Charts are reproducible CanvasXpress widgets usable in R, R Markdown and Shiny.
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softwarevisualizationgeneexpressiondifferentialexpressionrnaseqsinglecelltranscriptomics
3.18 score 6 scripts